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USC-OGP 2-DE database

Two-dimensional polyacrylamide gel electrophoresis database


USC-OGP 2-DE database 
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Searching in 'USC-OGP 2-DE database' for entry matching: FHL1_HUMAN




USC-OGP 2-DE database:  FHL1_HUMAN


FHL1_HUMAN


General information about the entry
View entry in simple text format
Entry nameFHL1_HUMAN
Primary accession numberQ13642
integrated into USC-OGP 2-DE database on January 17, 2017 (release 1)
2D Annotations were last modified onJanuary 17, 2017 (version 1)
General Annotations were last modified on April 5, 2017 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Four and a half LIM domains protein 1; Short=FHL-1; AltName: Full=Skeletal muscle LIM-protein 1; Short=SLIM; Short=SLIM-1;.
Gene nameName=FHL1
Synonyms=SLIM1
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]   2D GEL CHARACTERIZATION
Author 1., Author 2.
Submitted (Mar-2011) to Current
2D PAGE maps for identified proteins
How to interpret a protein

UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10}
Homo sapiens (Human)
UVEAL_MELANOMA_3-10
  map experimental info
 
UVEAL_MELANOMA_3-10

MAP LOCATIONS:
pI=5.39; Mw=30456

Cross-references
UniProtKB/Swiss-ProtQ13642; FHL1_HUMAN.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 0.0
Entry nameFHL1_HUMAN
Primary accession numberQ13642
Secondary accession number(s) B7Z5T4 B7Z793 O95212 Q13230 Q13645 Q5JXI7 Q5M7Y6 Q6IB30 Q9NZ40 Q9UKZ8 Q9Y630
Sequence was last modified on January 23, 2007 (version 4)
Annotations were last modified on March 15, 2017 (version 172)
Name and origin of the protein
DescriptionRecName: Full=Four and a half LIM domains protein 1; Short=FHL-1; AltName: Full=Skeletal muscle LIM-protein 1; Short=SLIM; Short=SLIM-1;
Gene nameName=FHL1
Synonyms=SLIM1
Encoded onName=FHL1; Synonyms=SLIM1
Keywords3D-structure; Acetylation; Alternative splicing; Complete proteome; Cytoplasm; Developmental protein; Differentiation; Direct protein sequencing; Disease mutation; Emery-Dreifuss muscular dystrophy; Isopeptide bond; LIM domain; Metal-binding; Nucleus; Polymorphism; Reference proteome; Repeat; Ubl conjugation; Zinc; Zinc-finger.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLU60115; AAC52021.1; -; mRNA
EMBLU29538; AAC35421.1; -; mRNA
EMBLAF110763; AAD21579.1; -; Genomic_DNA
EMBLAF098518; AAC72390.1; -; mRNA
EMBLAF063002; AAC72886.1; -; mRNA
EMBLAF220153; AAF32351.1; -; mRNA
EMBLAK122708; BAG53680.1; -; mRNA
EMBLAK289411; BAF82100.1; -; mRNA
EMBLAK299381; BAH13020.1; -; mRNA
EMBLAK301642; BAH13529.1; -; mRNA
EMBLCR456974; CAG33255.1; -; mRNA
EMBLAL078638; CAC18881.1; -; Genomic_DNA
EMBLAL078638; CAI41062.1; -; Genomic_DNA
EMBLAL078638; CAI41055.1; ALT_INIT; Genomic_DNA
EMBLCH471150; EAW88476.1; -; Genomic_DNA
EMBLCH471150; EAW88478.1; -; Genomic_DNA
EMBLCH471150; EAW88479.1; -; Genomic_DNA
EMBLBC010998; AAH10998.1; -; mRNA
EMBLBC088369; AAH88369.1; ALT_INIT; mRNA
EMBLU60118; AAC50795.1; -; mRNA
CCDSCCDS14655.1; -. [Q13642-1]; .
CCDSCCDS55505.1; -. [Q13642-4]; .
CCDSCCDS55506.1; -. [Q13642-5]; .
CCDSCCDS55507.1; -. [Q13642-2]; .
CCDSCCDS76036.1; -. [Q13642-3]; .
PIRG01884; G01884; .
PIRJC4893; G02741; .
RefSeqNP_001153171.1; NM_001159699.1. [Q13642-5]; .
RefSeqNP_001153172.1; NM_001159700.1. [Q13642-1]; .
RefSeqNP_001153173.1; NM_001159701.1. [Q13642-4]; .
RefSeqNP_001153174.1; NM_001159702.2. [Q13642-2]; .
RefSeqNP_001153175.1; NM_001159703.1. [Q13642-3]; .
RefSeqNP_001153176.1; NM_001159704.1. [Q13642-1]; .
RefSeqNP_001161291.1; NM_001167819.1. [Q13642-1]; .
RefSeqNP_001440.2; NM_001449.4. [Q13642-1]; .
RefSeqXP_006724807.1; XM_006724744.2. [Q13642-2]; .
RefSeqXP_006724808.1; XM_006724745.3. [Q13642-2]; .
RefSeqXP_006724809.1; XM_006724746.2. [Q13642-2]; .
RefSeqXP_006724810.1; XM_006724747.2. [Q13642-1]; .
RefSeqXP_016884846.1; XM_017029357.1. [Q13642-1]; .
UniGeneHs.435369; -; .
PDB1X63; NMR; -; A=91-159
PDB2CUP; NMR; -; A=40-127
PDB2CUR; NMR; -; A=162-217
PDB2EGQ; NMR; -; A=211-280
PDBsum1X63; -; .
PDBsum2CUP; -; .
PDBsum2CUR; -; .
PDBsum2EGQ; -; .
ProteinModelPortalQ13642; -; .
SMRQ13642; -; .
BioGrid108564; 34; .
IntActQ13642; 29; .
STRING9606.ENSP00000071281; -; .
iPTMnetQ13642; -; .
PhosphoSitePlusQ13642; -; .
BioMutaFHL1; -; .
DMDM59800384; -; .
EPDQ13642; -; .
PaxDbQ13642; -; .
PeptideAtlasQ13642; -; .
PRIDEQ13642; -; .
TopDownProteomicsQ13642-1; -. [Q13642-1]; .
DNASU2273; -; .
EnsemblENST00000345434; ENSP00000071281; ENSG00000022267. [Q13642-2]; .
EnsemblENST00000370683; ENSP00000359717; ENSG00000022267. [Q13642-5]; .
EnsemblENST00000370690; ENSP00000359724; ENSG00000022267. [Q13642-1]; .
EnsemblENST00000394153; ENSP00000377709; ENSG00000022267. [Q13642-1]; .
EnsemblENST00000394155; ENSP00000377710; ENSG00000022267. [Q13642-2]; .
EnsemblENST00000535737; ENSP00000444815; ENSG00000022267. [Q13642-1]; .
EnsemblENST00000539015; ENSP00000437673; ENSG00000022267. [Q13642-4]; .
EnsemblENST00000543669; ENSP00000443333; ENSG00000022267. [Q13642-1]; .
EnsemblENST00000618438; ENSP00000477609; ENSG00000022267. [Q13642-3]; .
EnsemblENST00000628568; ENSP00000486782; ENSG00000022267. [Q13642-1]; .
EnsemblENST00000629039; ENSP00000486439; ENSG00000022267. [Q13642-1]; .
EnsemblENST00000630084; ENSP00000485897; ENSG00000022267. [Q13642-1]; .
GeneID2273; -; .
KEGGhsa:2273; -; .
UCSCuc004ezl.3; human. [Q13642-2]; .
CTD2273; -; .
DisGeNET2273; -; .
GeneCardsFHL1; -; .
GeneReviewsFHL1; -; .
HGNCHGNC:3702; FHL1; .
HPACAB020817; -; .
HPAHPA001040; -; .
HPAHPA001391; -; .
MalaCardsFHL1; -; .
MIM300163; gene; .
MIM300695; phenotype; .
MIM300696; phenotype; .
MIM300717; phenotype; .
MIM300718; phenotype; .
neXtProtNX_Q13642; -; .
OpenTargetsENSG00000022267; -; .
Orphanet155; Familial isolated hypertrophic cardiomyopathy; .
Orphanet97239; Reducing body myopathy; .
Orphanet98863; X-linked Emery-Dreifuss muscular dystrophy; .
Orphanet178461; X-linked myopathy with postural muscle atrophy; .
PharmGKBPA28141; -; .
eggNOGENOG410INGD; Eukaryota; .
eggNOGENOG410YDMU; LUCA; .
GeneTreeENSGT00760000118910; -; .
HOVERGENHBG074526; -; .
InParanoidQ13642; -; .
KOK14365; -; .
OMAEDQFYCV; -; .
OrthoDBEOG091G07C5; -; .
PhylomeDBQ13642; -; .
TreeFamTF318571; -; .
SIGNORQ13642; -; .
ChiTaRSFHL1; human; .
EvolutionaryTraceQ13642; -; .
GeneWikiFHL1; -; .
GenomeRNAi2273; -; .
PROPR:Q13642; -; .
ProteomesUP000005640; Chromosome X; .
BgeeENSG00000022267; -; .
ExpressionAtlasQ13642; baseline and differential; .
GenevisibleQ13642; HS; .
GOGO:0005737; C:cytoplasm; IDA:UniProtKB; .
GOGO:0005829; C:cytosol; IDA:HPA; .
GOGO:0005925; C:focal adhesion; IDA:UniProtKB; .
GOGO:0005634; C:nucleus; IDA:UniProtKB; .
GOGO:0005886; C:plasma membrane; IDA:BHF-UCL; .
GOGO:0044325; F:ion channel binding; IPI:BHF-UCL; .
GOGO:0008270; F:zinc ion binding; IEA:InterPro; .
GOGO:0009887; P:animal organ morphogenesis; NAS:UniProtKB; .
GOGO:0030154; P:cell differentiation; IEA:UniProtKB-KW; .
GOGO:0007517; P:muscle organ development; NAS:UniProtKB; .
GOGO:0030308; P:negative regulation of cell growth; IDA:UniProtKB; .
GOGO:2000134; P:negative regulation of G1/S transition of mitotic cell cycle; IDA:UniProtKB; .
GOGO:0010972; P:negative regulation of G2/M transition of mitotic cell cycle; IDA:UniProtKB; .
GOGO:0043268; P:positive regulation of potassium ion transport; IDA:BHF-UCL; .
GOGO:0003254; P:regulation of membrane depolarization; IDA:BHF-UCL; .
GOGO:1901016; P:regulation of potassium ion transmembrane transporter activity; IDA:BHF-UCL; .
Gene3D2.10.110.10; -; 4; .
InterProIPR001781; Znf_LIM; .
PfamPF00412; LIM; 3; .
SMARTSM00132; LIM; 3; .
PROSITEPS00478; LIM_DOMAIN_1; 3; .
PROSITEPS50023; LIM_DOMAIN_2; 3; .



USC-OGP 2-DE database image


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Database constructed and maintained by Angel Garcia, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server

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